Author: Michael R. Crusoe <crusoe@debian.org>
Description: use system package for snappy
Forwarded: not-needed

--- canu.orig/src/main.mk
+++ canu/src/main.mk
@@ -74,10 +74,6 @@
                 stores/tgTigSizeAnalysis.C \
                 stores/tgTigMultiAlignDisplay.C \
                 \
-                stores/libsnappy/snappy-sinksource.cc \
-                stores/libsnappy/snappy-stubs-internal.cc \
-                stores/libsnappy/snappy.cc \
-                \
                 stores/objectStore.C \
                 \
                 overlapInCore/overlapReadCache.C \
--- canu.orig/src/Makefile
+++ canu/src/Makefile
@@ -465,6 +465,7 @@
 
   CXXFLAGS  += -pthread -fopenmp -fPIC
   LDFLAGS   += -pthread -fopenmp -lm
+  LDLIBS    += -lsnappy
 
   BUILDSTACKTRACE ?= 1
 endif
--- canu.orig/src/meryl/src/Makefile
+++ canu/src/meryl/src/Makefile
@@ -446,6 +446,7 @@
 
   CXXFLAGS  += -pthread -fopenmp -fPIC
   LDFLAGS   += -pthread -fopenmp -lm
+  LDLIBS    += -lsnappy
 
   BUILDSTACKTRACE ?= 1
 endif
--- canu.orig/src/seqrequester/src/Makefile
+++ canu/src/seqrequester/src/Makefile
@@ -446,6 +446,7 @@
 
   CXXFLAGS  += -pthread -fopenmp -fPIC
   LDFLAGS   += -pthread -fopenmp -lm
+  LDLIBS    += -lsnappy
 
   BUILDSTACKTRACE ?= 1
 endif
--- canu.orig/src/utility/src/Makefile
+++ canu/src/utility/src/Makefile
@@ -443,6 +443,7 @@
 
   CXXFLAGS  += -pthread -fopenmp -fPIC
   LDFLAGS   += -pthread -fopenmp -lm
+  LDLIBS    += -lsnappy
 
   BUILDSTACKTRACE ?= 1
 endif
