# macsyfinder 20201209.dev
# /home/bneron/Projects/GEM/MacSyFinder/MacSyFinder/py37/bin/macsyfinder --sequence-db tests/data/base/test_4.fasta --db-type ordered_replicon --models-dir tests/data/models --models functional T12SS-simple-exch --multi-loci functional/T12SS-simple-exch --relative-path -w 8
# Systems found:

system id = UserReplicon_T12SS-simple-exch_3
model = functional/T12SS-simple-exch
replicon = UserReplicon
clusters = [('VICH001.B.00001.C001_01397', 'T1SS_abc', 6), ('VICH001.B.00001.C001_01398', 'T1SS_mfp', 7)], [('VICH001.B.00001.C001_01399', 'T1SS_abc', 14), ('VICH001.B.00001.C001_01400', 'T2SS_gspD', 15)]
occ = 2
wholeness = 1.000
loci nb = 2
score = 1.800

mandatory genes:
	- T1SS_abc: 2 (T1SS_abc, T1SS_abc)
	- T1SS_omf: 1 (T2SS_gspD)

accessory genes:
	- T1SS_mfp: 1 (T1SS_mfp)

neutral genes:

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