Description: Use shared libs
Subject: use-shared-libs
From: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
---
 kmer_counter/fastq_reader.h | 8 ++++----
 makefile                    | 8 ++------
 2 files changed, 6 insertions(+), 10 deletions(-)

--- kmc.orig/kmer_counter/fastq_reader.h
+++ kmc/kmer_counter/fastq_reader.h
@@ -16,8 +16,8 @@
 #include <stdio.h>
 #include <iostream>
 
-#include "libs/zlib.h"
-#include "libs/bzlib.h"
+#include <zlib.h>
+#include <bzlib.h>
 
 using namespace std;
 
--- kmc.orig/makefile
+++ kmc/makefile
@@ -36,10 +36,6 @@
 $(KMC_MAIN_DIR)/raduls_avx2.o \
 $(KMC_MAIN_DIR)/raduls_avx.o
 
-KMC_LIBS = \
-$(KMC_MAIN_DIR)/libs/libz.a \
-$(KMC_MAIN_DIR)/libs/libbz2.a
-
 KMC_DUMP_OBJS = \
 $(KMC_DUMP_DIR)/nc_utils.o \
 $(KMC_DUMP_DIR)/kmc_dump.o
@@ -64,10 +60,6 @@
 $(KMC_TOOLS_DIR)/fastq_writer.o \
 $(KMC_TOOLS_DIR)/percent_progress.o
 
-KMC_TOOLS_LIBS = \
-$(KMC_TOOLS_DIR)/libs/libz.a \
-$(KMC_TOOLS_DIR)/libs/libbz2.a
-
 $(KMC_OBJS) $(KMC_DUMP_OBJS) $(KMC_API_OBJS): %.o: %.cpp
 	$(CC) $(CFLAGS) -c $< -o $@
 
--- kmc.orig/kmc_tools/fastq_reader.h
+++ kmc/kmc_tools/fastq_reader.h
@@ -17,8 +17,8 @@
 #include <stdio.h>
 #include <iostream>
 
-#include "libs/zlib.h"
-#include "libs/bzlib.h"
+#include <zlib.h>
+#include <bzlib.h>
 
 
 using namespace std;
@@ -96,4 +96,4 @@
 
 #endif
 
-// ***** EOF
\ No newline at end of file
+// ***** EOF
